Protein ZmIAA27
ZmIAA27 is a protein in the Aux/IAA family.
Information
Coreg Name: ZmIAA27
Species: Maize
Coreg Family: Aux/IAA
Gene Name(Synonym): BIF1
Uniprot ID: B4FBC6

Protein ZmIAA27

ZmIAA27 is a protein in the Aux/IAA family.

Overview of domains present in v5 transcripts
PF02309
Zm00001eb336930_T003
Zm00001eb336930_T001
Zm00001eb336930_T002
Zm00001eb336930_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d008749DAPseq no logo sequence fimo position
Zm00001d008749DAPseq no logo sequence fimo position
Zm00001d008749ChIPseq no logo sequence fimo position
Zm00001d008749PChIPseq no logo sequence fimo position

Interactions where ZmIAA27 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmIAA27 is the target  
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There are 159 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb336930_T003 from maize genome v5

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERYVPAGCARREVRRRR
EEAGGRGERDGVRAHVRGQGWRLDARRRRPLEDVRGDLPAPSPDERFRGR

MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERYVPAGCARREVRRRR
EEAGGRGERDGVRAHVRGQGWRLDARRRRPLEDVRGDLPAPSPDERFRGR

MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERYVPAGCARREVRRRR
EEAGGRGERDGVRAHVRGQGWRLDARRRRPLEDVRGDLPAPSPDERFRGR

MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERYVPAGCARREVRRRR
EEAGGRGERDGVRAHVRGQGWRLDARRRRPLEDVRGDLPAPSPDERFRGR

MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERYVPAGCARREVRRRR
EEAGGRGERDGVRAHVRGQGWRLDARRRRPLEDVRGDLPAPSPDERFRGR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02309
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Nucleotide Sequence
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CTTCCCCTTCGCCCTGCCTCCCTCT...

GRMZM2G130953_T01 from maize genome v3


Related TFome: pUT5766

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERYVPAGCARREVRRRR
EEAGGRGERDGVRAHVRGQGWRLDARRRRPLEDVRGDLPAPSPDERFRGR

Nucleotide Sequence
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ATAAACTCAACCACCTCCGGAGTCC...

GRMZM2G130953_T02 from maize genome v3

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWK
MFVETCRRLRLMKGSEAVNLAPRAAR

Nucleotide Sequence
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ATAAACTCAACCACCTCCGGAGTCC...

GRMZM2G130953_T03 from maize genome v3

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWK

Nucleotide Sequence
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ATAAACTCAACCACCTCCGGAGTCC...

GRMZM2G130953_T04 from maize genome v3

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERYVPAGCARREVRRRR
EEAGGRGERDGVRAHVRGQGWRLDARRRRPLEVSSFALSLLLSLI

Nucleotide Sequence
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ATAAACTCAACCACCTCCGGAGTCC...

Zm00001d008749_T001 from maize genome v4

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTISQCFVHRPALGLVFRSALLCLIERMFVETCRRLRLMKGS
EAVNLGTTKSRPMRRKRNSSVTSTHWLLVAWLVGGTRERTSSLF

Nucleotide Sequence
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ATAAACTCAACCACCTCCGGAGTCC...

Zm00001d008749_T002 from maize genome v4

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWK
MFVETCRRLRLMKGSEAVNLGTTKSRPMRRKRNSSVTSTHWLLVAWLVGGTRERTSSLF

Nucleotide Sequence
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ATAAACTCAACCACCTCCGGAGTCC...

Zm00001d008749_T003 from maize genome v4

Amino Acid Sequence
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MTPSLCCSLTPLVSALPSLLRQCSHTDQIELRLMLLAPNVSLLLLLVLLAF

Nucleotide Sequence
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TCGGCGACGTCCCCTGGAAGTGAGC...

Zm00001d008749_T004 from maize genome v4

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWK
MFVETCRRLRLMKGSEAVNLAPRAAR

Nucleotide Sequence
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TCCCCCGTTGGCCTTCTCCTTCCCC...

Zm00001eb336930_T001 from maize genome v5

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVDLQAYGGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCRRLRL
MKGSEAVNLAPRAAR

Nucleotide Sequence
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CAAAACTATCGCGACCTGGCGAATG...

Zm00001eb336930_T002 from maize genome v5

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWK

Nucleotide Sequence
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CTCCTTCCCCTTCGCCCTGCCTCCC...

Zm00001eb336930_T004 from maize genome v5

Amino Acid Sequence
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MSVDTERSSTESSAASGLGYEDTALALTLRLPGSDPGRSSPLAAPSDAAPSPKTRVVGWPPVRSYRKNALADSSKANRSA
SFVKVAVDGAAYLRKVDLQAYGGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWK
MFVETCRRLRLMKGSEAVNLAPRAAR

Nucleotide Sequence
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CCCTCTCTCAGTCTCTCTCCGGCCT...


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